Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015823048.1_cds_XP_016501362.1_15101
CDS Infomation

[gene=LOC107819734] [db_xref=GeneID:107819734] [protein=uncharacterized protein LOC107819734 isoform X3] [protein_id=XP_016501362.1] [location=join(2556..2849,3382..3570,3662..3745,4287..4346,5059..5103,5606..5805,5949..6410,6567..6693,6800..6997,7190..7279,8085..8178,8447..8521,8615..8628)] [gbkey=CDS]
Sequence

ATGGAGAAAATTGAAGAGTCTGGTAGCCCAGGTTGGGGTGCATCGTTTTTTCAAACAACG
GAAGATGTTGCAAGAGCTGTTACTGCTGCTGCAGCTGCTGTTCGGTCACCACGACCTTCC
GTGGTATATTCATCTAAAGATGATAGTGGTAGCCAGCTTCAGAAACTTCAGCGTCAAGTA
TCTAGATTAATGAAAGGCTTATCCAGTCCCCCTCAAGTTAAAAGTGGGGCCTATAACCCG
GAAATACTGACTAGCCAAAAGCGTCAGTGGGCTAGGTTTCAGTTGCAATCCCTGGATCAT
AGAGTTTGGAAAGAGCCGTCAAGGCTTTTTGAGAGCATGGTAGTTGTTGGACTCCATCCT
AACTGTGATATTCAAGCACTTCAAAGGCTTTATTTTTCAAGAAAGCTAGACGCCCCAGGG
AGATTTAGAAGCGCACTCGGTGGTCAAAGTCAATCACGTGTGGAACCTAACCTTGAGCCT
CAGGTCTTGTTTGTTTACCCTCCAGAGAAGCAACTCCCACTAAAATACAAGGATCTTCTC
TCATTCTGCTTTCCCGCTGGAGTAGAGGTTCATGCTGTTGAGAGAACTCCATCAATGAGT
GAGTTAAATGAAATACTTCTGGGTCAGGAACACCTTAAACAAAGTGATCTATCTTTTGTG
TTCCGGCTTCAGGTTGCTGATAGTTCAACTCTGTACGGTTGCTGTGTTCTAGTTGAGGAA
ATGGTCCATAAACCCTCTGGATTGCTTTCCATGATTTCAGATGGACAACATACCCACTTG
GGTATTAGCCGCCAAATTTTAACGACACGCCGCTGTTATTGCATTCTTTCCAGACTTCCA
TTTTTCGATCTTCACTTTGGTGTATTAAATAGCATTTTCACTGAAGAAAGATTGGAGCGG
TTAACAAAACAAGTTGGTGATCTTGATTTTGATTCCCTTATGATTGATGATAAGCAAGAA
AATCTGGAAGAAAATCCTTCCAGCAGATCATTGGAAGAAAGAGATCAGTACATCCTGAAT
GGCTCTGTAGAAAGCTCCCAACCAATCACGACTGATTCTGTGATTAGTGGAACTGTTGAT
GACATGTCTCAGCTGGAGTATAGAGTTGTAGAAGGGTACGTACACCCAAAGAAAGATGGA
AGTGATAACAAGGCGCATATGGTTGATACTGACATAGATTGTGCTAATAAAGAAGTTATA
CTTGAAAGGCAAGTCCCTGAAGCTTCTGATAATTCCACTGATGATAACAAACAATTGGTA
GAAAAGGGTGTACCGCATGCTGTTTTGCCACTTTTAAGATATCATCAGTGCGAAAGTTCT
GAATCTTCGTCTAGCTTCCAGGGCTCTCCTAGTGAAGATAGACATTTTAGAAGTGATTTT
GATGAGACCGAAACGGAGGAAGCATCCTTTTCTGGTCAAGATGATTCAAGTCAGCATAGT
GATATAGTAGAATGGGCAAAGGCCAACAATAATGGATCTTTGCAAATAATATGTGAATAT
TACCAGCTAAAATGTCCTGCAAGGGGCTCAACAATTAAGTTCCATCCTCTGGATCACCTT
CATCCTTTAGAATACCATAGACCTGACGAAGCACTTTTGCACGTTGCTGGATCGACAATT
GACTTAAAATCATGCAATACAAGTTTGGAGTTAGCTGAGGCTCACAATGCACTCATGGTG
GAAGAGGAAGCAACTGCTCTGTCAGTCTGGGCTATTGCATGCTTATGTGGCTCATTGCGG
CTTGAACACGTTCTGACACTGTTTGCGGGAGCTTTACTGGAGAAGCAAATTGTTGTGGTT
TGTTCAAATTTGGTACGTATCAGTTGGCGGCATCTTTTGTATGGGAATATTGTCTGCTTG
CGTTCTGTCCATTATCCCTTTGATTCGTCCTTATCAGTGGCAAAGCTTGATAATGCCGGT
TTTGCCAAATGA

Peptide Sequence

PEP ID

XP_016501362.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107819734 isoform X3 [Nicotiana tabacum]
Sequence

MEKIEESGSPGWGASFFQTTEDVARAVTAAAAAVRSPRPSVVYSSKDDSGSQLQKLQRQV
SRLMKGLSSPPQVKSGAYNPEILTSQKRQWARFQLQSLDHRVWKEPSRLFESMVVVGLHP
NCDIQALQRLYFSRKLDAPGRFRSALGGQSQSRVEPNLEPQVLFVYPPEKQLPLKYKDLL
SFCFPAGVEVHAVERTPSMSELNEILLGQEHLKQSDLSFVFRLQVADSSTLYGCCVLVEE
MVHKPSGLLSMISDGQHTHLGISRQILTTRRCYCILSRLPFFDLHFGVLNSIFTEERLER
LTKQVGDLDFDSLMIDDKQENLEENPSSRSLEERDQYILNGSVESSQPITTDSVISGTVD
DMSQLEYRVVEGYVHPKKDGSDNKAHMVDTDIDCANKEVILERQVPEASDNSTDDNKQLV
EKGVPHAVLPLLRYHQCESSESSSSFQGSPSEDRHFRSDFDETETEEASFSGQDDSSQHS
DIVEWAKANNNGSLQIICEYYQLKCPARGSTIKFHPLDHLHPLEYHRPDEALLHVAGSTI
DLKSCNTSLELAEAHNALMVEEEATALSVWAIACLCGSLRLEHVLTLFAGALLEKQIVVV
CSNLVRISWRHLLYGNIVCLRSVHYPFDSSLSVAKLDNAGFAK

Transcript Sequence

Gene sequence data has not been registered.